EnhancerDB
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  3. rs553519933[chr12:52426975]
Enhancers that have rs553519933[chr12:52426975]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 52415565 52430755 enh2354
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Blood (T-cell) Blood (OCI-LY7) Stomach Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Pancreas Pancreas (Panc1) Uterus Thymus Heart
chr12 52426547 52427164 vista13435
VISTA
Transcript factors that have rs553519933[chr12:52426975]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 52425992 52427385 POLR2A UCSC Txn Factor no Conserved 108032910
chr12 52425992 52427385 POLR2A UCSC Txn Factor no Conserved 108032911
chr12 52426471 52427001 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546016
chr12 52426471 52427001 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032914
chr12 52426582 52426986 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546018
chr12 52426582 52426986 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032918
chr12 52426612 52427208 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108032919
chr12 52426615 52427079 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546019
chr12 52426615 52427079 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032920
chr12 52426622 52427006 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546020
chr12 52426622 52427006 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032921
chr12 52426656 52426996 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546023
chr12 52426656 52426996 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032924
chr12 52426662 52427178 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546024
chr12 52426662 52427178 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032925
chr12 52426665 52427045 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108032926
chr12 52426666 52426986 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108032927
chr12 52426669 52427069 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21546025
chr12 52426669 52427069 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108032928
chr12 52426675 52427055 NFYB UCSC Txn Factor no Conserved 108032929
chr12 52426675 52427055 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108032930
chr12 52426692 52427102 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108032931
chr12 52426693 52427033 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21546026
chr12 52426693 52427033 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108032932
chr12 52426693 52427053 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546027
chr12 52426693 52427053 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032933
chr12 52426694 52427190 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546028
chr12 52426694 52427190 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032934
chr12 52426696 52427036 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546029
chr12 52426696 52427036 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032935
chr12 52426697 52427033 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21546030
chr12 52426697 52427033 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108032936
chr12 52426713 52427037 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108032938
chr12 52426714 52426978 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546032
chr12 52426714 52426978 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032939
chr12 52426714 52427038 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546033
chr12 52426714 52427038 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032940
chr12 52426715 52427019 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546034
chr12 52426715 52427019 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032941
chr12 52426720 52427116 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546036
chr12 52426720 52427116 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032943
chr12 52426726 52427450 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546037
chr12 52426726 52427450 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032945
chr12 52426731 52427051 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108032947
chr12 52426732 52427108 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21546039
chr12 52426732 52427108 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108032949
chr12 52426736 52427192 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546040
chr12 52426736 52427192 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032950
chr12 52426739 52426989 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108032951
chr12 52426741 52427017 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21546041
chr12 52426741 52427017 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108032952
chr12 52426741 52427117 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21546042
chr12 52426741 52427117 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108032953
chr12 52426743 52427043 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546043
chr12 52426743 52427043 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032954
chr12 52426745 52426989 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108032955
chr12 52426745 52427025 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546044
chr12 52426745 52427025 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032956
chr12 52426746 52427010 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546045
chr12 52426746 52427010 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032957
chr12 52426746 52427082 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546046
chr12 52426746 52427082 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032958
chr12 52426750 52427006 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546047
chr12 52426750 52427006 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032959
chr12 52426752 52427142 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21546049
chr12 52426752 52427142 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108032961
chr12 52426762 52426986 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21546050
chr12 52426762 52426986 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108032962
chr12 52426786 52427066 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108032965
chr12 52426786 52427262 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546053
chr12 52426786 52427262 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032966
chr12 52426791 52427227 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108032967
chr12 52426796 52427186 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546054
chr12 52426796 52427186 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032968
chr12 52426797 52427093 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108032969
chr12 52426798 52427374 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546055
chr12 52426798 52427374 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032970
chr12 52426805 52427245 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546056
chr12 52426805 52427245 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032971
chr12 52426806 52427005 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108032972
chr12 52426810 52427180 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546057
chr12 52426810 52427180 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032973
chr12 52426813 52427249 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546058
chr12 52426813 52427249 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032974
chr12 52426815 52426993 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108032975
chr12 52426816 52427126 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108032976
chr12 52426816 52427356 GABPA UCSC Txn Factor no Conserved 108032977
chr12 52426816 52427356 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 108032978
chr12 52426828 52427292 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21546059
chr12 52426828 52427292 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108032979
chr12 52426829 52427219 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546060
chr12 52426829 52427219 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032980
chr12 52426832 52427136 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108032981
chr12 52426833 52427233 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546061
chr12 52426833 52427233 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032982
chr12 52426834 52427144 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108032983
chr12 52426840 52427244 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546062
chr12 52426840 52427244 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032984
chr12 52426847 52427231 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21546063
chr12 52426847 52427231 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108032985
chr12 52426855 52427115 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108032986
chr12 52426856 52427132 EGR1 UCSC Txn Factor no Conserved 108032987
chr12 52426856 52427132 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108032988
chr12 52426867 52427243 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108032989
chr12 52426870 52427094 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546064
chr12 52426870 52427094 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032990
chr12 52426890 52427168 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546065
chr12 52426890 52427168 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032991
chr12 52426894 52427135 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546066
chr12 52426894 52427135 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032992
chr12 52426907 52427231 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108032993
chr12 52426912 52427242 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546067
chr12 52426912 52427242 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032994
chr12 52426918 52427274 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108032995
chr12 52426924 52426998 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108032996
chr12 52426929 52427081 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546068
chr12 52426929 52427081 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108032997
chr12 52426932 52427012 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21546069
chr12 52426932 52427012 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 108032998
chr12 52426932 52427279 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21546070
chr12 52426932 52427279 PHF8 UCSC Txn Factor no Conserved 108032999
chr12 52426932 52427279 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108033000
chr12 52426959 52427075 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108033001
chr12 52426962 52426981 PAX5 JASPAR yes 82405185
chr12 52426962 52426981 PAX5 JASPAR yes 120914577
chr12 52426973 52426978 SP1 TRANSFAC yes 82405186
chr12 52426973 52426978 SP1 TRANSFAC yes 120914578
chr12 52426973 52426979 SP1 TRANSFAC yes 82405187
chr12 52426973 52426979 SP1 TRANSFAC yes 120914579
chr12 52426973 52426980 SP1 TRANSFAC yes 82405188
chr12 52426973 52426980 SP1 TRANSFAC yes 120914580
chr12 52426975 52426984 TFAP2A JASPAR yes 82405189
chr12 52426975 52426984 TFAP2A JASPAR yes 120914581
Genes associated with rs553519933[chr12:52426975], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More