EnhancerDB
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  3. rs553522317[chr17:80248041]
Enhancers that have rs553522317[chr17:80248041]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 80234785 80270055 enh4646
Bone Marrow (K562) Brain (SK-N-MC) Liver Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs553522317[chr17:80248041]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 80247341 80249571 TCF7L2 GTRD no Colon (HCT116) 21798690
chr17 80247367 80249648 TCF7L2 GTRD no Colon (HCT116) 21798691
chr17 80247512 80249378 TCF7L2 GTRD no Colon (HCT116) 21798692
chr17 80247516 80249647 ZNF143 GTRD no Epithelial (MCF-7) 21798693
chr17 80247525 80249658 TCF7L2 GTRD no Colon (HCT116) 21798694
chr17 80247526 80248299 ZNF143 GTRD no Epithelial (MCF-7) 21798695
chr17 80247549 80248169 ZNF274 GTRD no Bone Marrow (K562) 21798696
chr17 80247593 80248183 TCF7L2 GTRD no Colon (HCT116) 21798697
chr17 80247698 80248248 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798698
chr17 80247967 80248327 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798699
chr17 80247976 80248472 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798700
chr17 80247979 80248495 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798701
chr17 80247988 80248264 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798702
chr17 80248002 80248352 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798703
chr17 80248005 80248375 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798704
chr17 80248008 80248424 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798705
chr17 80248008 80248464 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798706
chr17 80248013 80248453 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798707
chr17 80248018 80248418 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798708
chr17 80248026 80248046 TBX19 JASPAR yes 56358447
chr17 80248028 80248044 T JASPAR yes 56358448
chr17 80248036 80248316 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798709
chr17 80248039 80248615 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798710
chr17 80248040 80248350 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21798711
Genes associated with rs553522317[chr17:80248041], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More