EnhancerDB
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  3. rs553530446[chr5:179251710]
Enhancers that have rs553530446[chr5:179251710]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 179241645 179258975 enh22874
Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Colon (HCT116) Thyroid Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Uterus Stomach
Transcript factors that have rs553530446[chr5:179251710]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 179251707 179251711 TEAD2 TRANSFAC yes 68191377
chr5 179251707 179251722 PRDM1 JASPAR yes 68191378
chr5 179251710 179251723 SMAD2 JASPAR yes 68191379
Genes associated with rs553530446[chr5:179251710], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More