EnhancerDB
  1. Home
  2. SNP
  3. rs553564229[chr16:391539]
Enhancers that have rs553564229[chr16:391539]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs553564229[chr16:391539]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 391535 391555 RREB1 JASPAR yes 9107241
chr16 391538 391552 PLAG1 JASPAR yes 9107242
Genes associated with rs553564229[chr16:391539], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More