EnhancerDB
  1. Home
  2. SNP
  3. rs553569514[chr17:79402272]
Enhancers that have rs553569514[chr17:79402272]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 79375645 79405275 enh17444
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553569514[chr17:79402272]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 79399593 79402335 ZBTB33 GTRD no Lung (A549) 108309627
chr17 79399593 79402335 ZBTB33 GTRD no Lung (A549) 108309628
chr17 79399593 79402335 ZBTB33 GTRD no Lung (A549) 108309629
chr17 79400497 79402428 ZBTB33 GTRD no Lung (A549) 108309637
chr17 79400499 79402278 TCF7L2 GTRD no Colon (HCT116) 21797985
chr17 79400499 79402278 TCF7L2 GTRD no Colon (HCT116) 108309638
chr17 79400647 79402332 ZBTB33 GTRD no Lung (A549) 108309651
chr17 79400879 79402291 ZNF143 GTRD no Epithelial (MCF-7) 108309683
chr17 79402268 79402274 SP1 TRANSFAC yes 56327729
chr17 79402268 79402278 SP1 JASPAR yes 56327730
chr17 79402270 79402275 SP1 TRANSFAC yes 56327731
Genes associated with rs553569514[chr17:79402272], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More