EnhancerDB
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  3. rs553577890[chr6:43461284]
Enhancers that have rs553577890[chr6:43461284]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 43457787 43465615 enh39001
Skin (Keratinocyte) Cervix (HeLa-S3) Brain (SK-N-SH) Large Intestine Esophagus Astrocyte Bone (Osteoblast) Stomach Muscle (A673) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Blood (T-cell) Heart
Transcript factors that have rs553577890[chr6:43461284]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 43461271 43461284 SMAD2 JASPAR yes 101771993
chr6 43461272 43461291 CTCF JASPAR yes 101771994
chr6 43461273 43461284 E2F6 JASPAR yes 101771995
chr6 43461279 43461290 EBF1 JASPAR yes 101771996
Genes associated with rs553577890[chr6:43461284], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More