EnhancerDB
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  3. rs553582677[chr9:38690659]
Enhancers that have rs553582677[chr9:38690659]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr9 38668660 38692880 enh41890
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Ovary Astrocyte Lung (A549) Blood (GM12878) Muscle (A673) Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Neural Stem Cells (H9) Thymus Heart
Transcript factors that have rs553582677[chr9:38690659]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr9 38690653 38690672 RFX2 JASPAR yes 84071500
chr9 38690657 38690673 RFX2 JASPAR yes 84071501
chr9 38690657 38690673 RFX3 JASPAR yes 84071502
chr9 38690657 38690673 RFX4 JASPAR yes 84071503
chr9 38690657 38690673 RFX5 JASPAR yes 84071504
Genes associated with rs553582677[chr9:38690659], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More