EnhancerDB
  1. Home
  2. SNP
  3. rs553598979[chr1:220907177]
Enhancers that have rs553598979[chr1:220907177]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 220903525 220910295 enh941
Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Ovary Lung (PC-9) Astrocyte Bone (Osteoblast) Lung Stomach Placenta Colon (HCT116) Blood (Karpas-422) Muscle (Myoblast) Pancreas Pancreas (Panc1) Muscle (Myotube) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs553598979[chr1:220907177]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 220905857 220907226 TCF7L2 GTRD no Colon (HCT116) 21381759
chr1 220905985 220907735 ZNF274 GTRD no Cervix (HeLa-S3) 21381760
chr1 220906003 220907605 ZNF143 GTRD no Epithelial (MCF-7) 21381761
chr1 220906030 220907488 ZNF143 GTRD no Epithelial (MCF-7) 21381762
chr1 220906037 220907587 ZNF143 GTRD no Epithelial (MCF-7) 21381763
chr1 220906062 220907355 ZNF143 GTRD no Epithelial (MCF-7) 21381764
chr1 220906075 220907623 ZNF143 GTRD no Epithelial (MCF-7) 21381765
chr1 220906076 220907589 ZNF143 GTRD no Epithelial (MCF-7) 21381766
chr1 220906134 220907393 ZNF274 GTRD no Cervix (HeLa-S3) 21381768
chr1 220906171 220907517 ZNF274 GTRD no Cervix (HeLa-S3) 21381771
chr1 220906187 220907509 ZNF143 GTRD no Epithelial (MCF-7) 21381774
chr1 220906237 220907456 ZNF274 GTRD no Cervix (HeLa-S3) 21381776
chr1 220906265 220907468 TEF1 GTRD no Bone (Osteoblast) 21381779
chr1 220906268 220907538 ZNF274 GTRD no Cervix (HeLa-S3) 21381780
chr1 220906273 220907442 ZNF143 GTRD no Epithelial (MCF-7) 21381781
chr1 220906315 220907980 ZNF143 GTRD no Epithelial (MCF-7) 21381786
chr1 220906376 220907211 ZNF143 GTRD no Epithelial (MCF-7) 21381790
chr1 220906491 220907464 ZNF143 GTRD no Epithelial (MCF-7) 21381796
chr1 220906562 220907482 ZNF274 GTRD no Cervix (HeLa-S3) 21381801
chr1 220906584 220907740 ZNF274 GTRD no Cervix (HeLa-S3) 21381802
chr1 220906609 220907392 ZNF274 GTRD no Cervix (HeLa-S3) 21381803
chr1 220906657 220907731 ZNF274 GTRD no Cervix (HeLa-S3) 21381804
chr1 220906710 220907436 ZNF274 GTRD no Cervix (HeLa-S3) 21381805
chr1 220906727 220907434 ZNF143 GTRD no Epithelial (MCF-7) 21381806
chr1 220906731 220907343 ZNF143 GTRD no Epithelial (MCF-7) 21381807
chr1 220906740 220907419 ZNF274 GTRD no Cervix (HeLa-S3) 21381808
chr1 220906741 220907472 ZNF143 GTRD no Epithelial (MCF-7) 21381809
chr1 220906768 220907546 ZNF143 GTRD no Epithelial (MCF-7) 21381810
chr1 220906777 220907468 ZNF143 GTRD no Epithelial (MCF-7) 21381811
chr1 220906797 220907467 ZNF143 GTRD no Epithelial (MCF-7) 21381812
chr1 220906803 220907395 ZNF143 GTRD no Epithelial (MCF-7) 21381813
chr1 220906829 220907299 ZNF143 GTRD no Epithelial (MCF-7) 21381814
chr1 220906848 220907348 ZNF143 GTRD no Epithelial (MCF-7) 21381815
chr1 220906849 220907440 ZNF143 GTRD no Epithelial (MCF-7) 21381816
chr1 220906861 220907446 ZNF274 GTRD no Cervix (HeLa-S3) 21381817
chr1 220906865 220907540 ZNF143 GTRD no Epithelial (MCF-7) 21381818
chr1 220906897 220907409 ZNF143 GTRD no Epithelial (MCF-7) 21381819
chr1 220906944 220907191 ZNF143 GTRD no Epithelial (MCF-7) 21381820
chr1 220906973 220907250 ZNF143 GTRD no Epithelial (MCF-7) 21381821
chr1 220906990 220907333 ZNF274 GTRD no Cervix (HeLa-S3) 21381822
chr1 220907005 220907361 ZNF143 GTRD no Epithelial (MCF-7) 21381823
chr1 220907168 220907178 MZF1 JASPAR yes 35506373
chr1 220907171 220907177 MZF1 JASPAR yes 35506375
Genes associated with rs553598979[chr1:220907177], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More