EnhancerDB
  1. Home
  2. SNP
  3. rs553606704[chr12:125109431]
Enhancers that have rs553606704[chr12:125109431]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 125108500 125127069 enh15092
Bone Marrow (K562) Brain (SK-N-MC) Colon (HCT116) Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Ovary Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Prostate (RWPE1) Lung Muscle (A673) Heart
Transcript factors that have rs553606704[chr12:125109431]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 125109423 125109438 TFAP2A JASPAR yes 124400552
chr12 125109424 125109438 EBF1 JASPAR yes 124400553
chr12 125109425 125109436 EBF1 JASPAR yes 124400554
chr12 125109426 125109438 TFAP2A JASPAR yes 124400555
chr12 125109426 125109438 TFAP2B JASPAR yes 124400556
chr12 125109426 125109438 TFAP2C JASPAR yes 124400557
chr12 125109426 125109441 TFAP2A JASPAR yes 124400558
chr12 125109426 125109441 TFAP2C JASPAR yes 124400559
chr12 125109427 125109438 EBF1 JASPAR yes 124400560
chr12 125109427 125109438 TFAP2A JASPAR yes 124400561
chr12 125109428 125109437 TFAP2A JASPAR yes 124400562
Genes associated with rs553606704[chr12:125109431], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More