EnhancerDB
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  3. rs553626798[chr16:376372]
Enhancers that have rs553626798[chr16:376372]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 364825 394775 enh16487
Bone Marrow (K562) Astrocyte Colon (HCT116) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs553626798[chr16:376372]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 375960 380365 ZNF143 GTRD no Epithelial (MCF-7) 21683846
chr16 375960 380365 ZNF143 GTRD no Epithelial (MCF-7) 108170225
chr16 376036 377701 ZNF143 GTRD no Epithelial (MCF-7) 21683847
chr16 376036 377701 ZNF143 GTRD no Epithelial (MCF-7) 108170226
chr16 376353 376374 IRF1 JASPAR yes 9104821
chr16 376354 376375 IRF1 JASPAR yes 9104823
chr16 376355 376376 IRF1 JASPAR yes 9104825
chr16 376356 376377 IRF1 JASPAR yes 9104827
chr16 376357 376372 FOXP1 JASPAR yes 9104828
chr16 376357 376378 IRF1 JASPAR yes 9104829
chr16 376358 376373 FOXP1 JASPAR yes 9104830
chr16 376359 376374 FOXP1 JASPAR yes 9104831
chr16 376365 376376 FOXC1 JASPAR yes 9104832
chr16 376372 376383 FOXB1 JASPAR yes 9104833
Genes associated with rs553626798[chr16:376372], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More