EnhancerDB
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  3. rs553627433[chr2:224642850]
Enhancers that have rs553627433[chr2:224642850]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 224641685 224672795 enh6172
Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Blood (OCI-LY7) Muscle (A673) Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Neural Stem Cells (H9) Stomach
Transcript factors that have rs553627433[chr2:224642850]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 224642832 224642852 RREB1 JASPAR yes 81285465
chr2 224642833 224642853 RREB1 JASPAR yes 81285466
chr2 224642836 224642856 RREB1 JASPAR yes 81285468
chr2 224642837 224642857 RREB1 JASPAR yes 81285469
chr2 224642840 224642852 FOXI1 JASPAR yes 81285470
chr2 224642841 224642861 RREB1 JASPAR yes 81285471
chr2 224642843 224642858 FOXA1 JASPAR yes 81285472
chr2 224642844 224642856 FOXI1 JASPAR yes 81285473
chr2 224642844 224642859 FOXP1 JASPAR yes 81285474
chr2 224642845 224642857 FOXC2 JASPAR yes 81285475
chr2 224642847 224642858 FOXA1 JASPAR yes 81285476
chr2 224642848 224642863 FOXP1 JASPAR yes 81285477
chr2 224642849 224642860 FOXP2 JASPAR yes 81285478
Genes associated with rs553627433[chr2:224642850], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More