EnhancerDB
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  3. rs553627643[chr1:182272178]
Enhancers that have rs553627643[chr1:182272178]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 182267181 182275215 enh12439
Bone Marrow (K562) Liver (HepG2) Brain (SK-N-MC) Large Intestine Esophagus Stomach Muscle (A673) Placenta Breast Thyroid Peripheral Blood (MM.1S) Lung (PC-9) Pancreas Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs553627643[chr1:182272178]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 182271803 182272413 ZNF274 GTRD no Bone Marrow (K562) 21357919
chr1 182272158 182272179 IRF1 JASPAR yes 33614123
chr1 182272159 182272180 IRF1 JASPAR yes 33614125
chr1 182272160 182272181 IRF1 JASPAR yes 33614127
chr1 182272161 182272182 IRF1 JASPAR yes 33614129
chr1 182272162 182272183 IRF1 JASPAR yes 33614131
chr1 182272163 182272178 FOXP1 JASPAR yes 33614132
chr1 182272163 182272184 IRF1 JASPAR yes 33614133
chr1 182272164 182272179 FOXP1 JASPAR yes 33614134
chr1 182272164 182272185 IRF1 JASPAR yes 33614135
chr1 182272165 182272180 FOXP1 JASPAR yes 33614136
chr1 182272165 182272186 IRF1 JASPAR yes 33614137
chr1 182272166 182272181 FOXP1 JASPAR yes 33614138
chr1 182272166 182272187 IRF1 JASPAR yes 33614139
chr1 182272167 182272182 FOXP1 JASPAR yes 33614140
chr1 182272169 182272184 FOXP1 JASPAR yes 33614141
chr1 182272171 182272186 FOXP1 JASPAR yes 33614142
chr1 182272174 182272195 IRF1 JASPAR yes 33614143
Genes associated with rs553627643[chr1:182272178], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More