EnhancerDB
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  3. rs553660979[chr12:92956412]
Enhancers that have rs553660979[chr12:92956412]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr12 92931041 92959835 enh14884
Liver Adrenal Pancreas Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Ovary Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Breast Spleen Muscle (Myotube) Prostate (RWPE1) Lung Heart
Transcript factors that have rs553660979[chr12:92956412]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr12 92955986 92956503 ZNF274 GTRD no Cervix (HeLa-S3) 21562800
chr12 92956000 92956556 ZNF274 GTRD no Cervix (HeLa-S3) 21562801
chr12 92956275 92956655 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 21562803
chr12 92956402 92956416 RORA JASPAR yes 122782687
chr12 92956405 92956415 RORA JASPAR yes 122782688
chr12 92956408 92956414 ESR1 TRANSFAC yes 122782689
chr12 92956410 92956414 ESR1 TRANSFAC yes 122782690
Genes associated with rs553660979[chr12:92956412], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More