EnhancerDB
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  3. rs553668242[chr1:209606439]
Enhancers that have rs553668242[chr1:209606439]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 209599449 209611412 enh12618
Bone Marrow (K562) Prostate (PC-3) Large Intestine Prostate (RWPE1) Bone (Osteoblast) Placenta Thyroid Uterus Embryonic Stem Cell Line (H1-hESC) Muscle (Myoblast) Neural Stem Cells (H9) Thymus Epithelial (MCF-7)
Transcript factors that have rs553668242[chr1:209606439]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 209601620 209608746 POLR2A UCSC Txn Factor no Conserved 107865814
chr1 209606299 209606969 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 21375456
chr1 209606299 209606969 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 107865815
Genes associated with rs553668242[chr1:209606439], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More