EnhancerDB
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  3. rs553668711[chr5:171574111]
Enhancers that have rs553668711[chr5:171574111]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 171565199 171613524 enh8878
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs553668711[chr5:171574111]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 171574106 171574121 FOXA1 JASPAR yes 67767791
chr5 171574108 171574116 FOXL1 JASPAR yes 67767792
chr5 171574108 171574119 FOXP2 JASPAR yes 67767793
chr5 171574108 171574120 FOXC2 JASPAR yes 67767794
chr5 171574109 171574117 FOXD1 JASPAR yes 67767795
chr5 171574109 171574117 FOXG1 JASPAR yes 67767796
chr5 171574109 171574117 FOXO3 JASPAR yes 67767797
chr5 171574109 171574120 FOXB1 JASPAR yes 67767798
chr5 171574109 171574120 FOXC1 JASPAR yes 67767799
chr5 171574110 171574117 FOXD2 JASPAR yes 67767800
chr5 171574110 171574117 FOXI1 JASPAR yes 67767801
chr5 171574110 171574117 FOXL1 JASPAR yes 67767802
chr5 171574110 171574117 FOXO4 JASPAR yes 67767803
chr5 171574110 171574117 FOXO6 JASPAR yes 67767804
chr5 171574110 171574117 FOXP3 JASPAR yes 67767805
chr5 171574110 171574121 FOXA1 JASPAR yes 67767806
chr5 171574111 171574126 HNF1A JASPAR yes 67767807
Genes associated with rs553668711[chr5:171574111], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More