EnhancerDB
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  3. rs553670942[chr18:55954326]
Enhancers that have rs553670942[chr18:55954326]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr18 55950385 55972855 enh32735
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Lung (PC-9) Astrocyte Lung Lung (A549) Blood (GM12878) Stomach Colon (HCT116) Muscle (Myoblast) Pancreas Pancreas (Panc1) Blood (T-cell) Heart
Transcript factors that have rs553670942[chr18:55954326]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr18 55954314 55954335 IRF1 JASPAR yes 110936911
chr18 55954316 55954337 IRF1 JASPAR yes 110936912
chr18 55954320 55954341 IRF1 JASPAR yes 110936913
chr18 55954321 55954336 FOXP1 JASPAR yes 110936914
chr18 55954322 55954343 IRF1 JASPAR yes 110936915
chr18 55954323 55954338 FOXP1 JASPAR yes 110936916
chr18 55954323 55954344 IRF1 JASPAR yes 110936917
chr18 55954324 55954344 RREB1 JASPAR yes 110936918
chr18 55954324 55954345 IRF1 JASPAR yes 110936919
chr18 55954325 55954340 FOXP1 JASPAR yes 110936920
chr18 55954326 55954341 FOXP1 JASPAR yes 110936921
Genes associated with rs553670942[chr18:55954326], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More