EnhancerDB
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  3. rs553680609[chr1:31162820]
Enhancers that have rs553680609[chr1:31162820]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 31146621 31183195 enh189
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Bone (Osteoblast) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Pancreas Muscle (Myotube) Uterus
Transcript factors that have rs553680609[chr1:31162820]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 31162811 31162826 STAT2 JASPAR yes 27871640
chr1 31162812 31162826 STAT1 JASPAR yes 27871641
chr1 31162819 31162824 H4TF1 TRANSFAC yes 27871642
Genes associated with rs553680609[chr1:31162820], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More