EnhancerDB
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  3. rs553690009[chr19:933860]
Enhancers that have rs553690009[chr19:933860]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr19 927725 963215 enh4948
Bone Marrow (K562) Liver (HepG2) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Astrocyte Bone (Osteoblast) Lung Blood (GM12878) Stomach Placenta Colon (HCT116) Thyroid Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Heart
Transcript factors that have rs553690009[chr19:933860]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr19 931738 934019 ZNF274 GTRD no Blood (GM12878) 21830518
chr19 931738 934019 ZNF274 GTRD no Blood (GM12878) 108348140
chr19 931752 934044 TCF7L2 GTRD no Colon (HCT116) 21830519
chr19 931752 934044 TCF7L2 GTRD no Colon (HCT116) 108348141
chr19 931796 935444 TCF7L2 GTRD no Colon (HCT116) 21830520
chr19 931796 935444 TCF7L2 GTRD no Colon (HCT116) 108348142
chr19 931796 935444 TCF7L2 GTRD no Colon (HCT116) 108348143
chr19 931815 935505 TCF7L2 GTRD no Colon (HCT116) 21830521
chr19 931815 935505 TCF7L2 GTRD no Colon (HCT116) 108348144
chr19 931815 935505 TCF7L2 GTRD no Colon (HCT116) 108348145
chr19 931890 935320 TCF7L2 GTRD no Colon (HCT116) 21830524
chr19 931890 935320 TCF7L2 GTRD no Colon (HCT116) 108348148
chr19 931890 935320 TCF7L2 GTRD no Colon (HCT116) 108348149
chr19 931895 934582 TCF7L2 GTRD no Colon (HCT116) 21830525
chr19 931895 934582 TCF7L2 GTRD no Colon (HCT116) 108348150
chr19 931950 933875 ZNF274 GTRD no Blood (GM12878) 21830526
chr19 931950 933875 ZNF274 GTRD no Blood (GM12878) 108348151
chr19 931970 934178 ZNF274 GTRD no Blood (GM12878) 21830527
chr19 931970 934178 ZNF274 GTRD no Blood (GM12878) 108348152
chr19 931987 935470 TCF7L2 GTRD no Colon (HCT116) 21830528
chr19 931987 935470 TCF7L2 GTRD no Colon (HCT116) 108348153
chr19 931987 935470 TCF7L2 GTRD no Colon (HCT116) 108348154
chr19 932337 934018 TCF7L2 GTRD no Colon (HCT116) 21830531
chr19 932337 934018 TCF7L2 GTRD no Colon (HCT116) 108348157
chr19 932512 934088 ZBTB33 GTRD no Brain (SK-N-SH) 21830542
chr19 932512 934088 ZBTB33 GTRD no Brain (SK-N-SH) 108348168
chr19 932660 934022 ZBTB33 GTRD no Brain (SK-N-SH) 21830554
chr19 932660 934022 ZBTB33 GTRD no Brain (SK-N-SH) 108348180
chr19 932716 934007 ZBTB33 GTRD no Brain (SK-N-SH) 21830557
chr19 932716 934007 ZBTB33 GTRD no Brain (SK-N-SH) 108348183
chr19 932752 934078 ZBTB33 GTRD no Brain (SK-N-SH) 21830559
chr19 932752 934078 ZBTB33 GTRD no Brain (SK-N-SH) 108348185
chr19 932911 933887 ZBTB33 GTRD no Brain (SK-N-SH) 21830568
chr19 932911 933887 ZBTB33 GTRD no Brain (SK-N-SH) 108348194
chr19 932920 933890 ZBTB33 GTRD no Lung (A549) 108348195
chr19 932926 933923 ZNF274 GTRD no Blood (GM12878) 21830569
chr19 932926 933923 ZNF274 GTRD no Blood (GM12878) 108348196
chr19 933073 933940 P63 GTRD no Skin (Keratinocyte) 108348206
chr19 933080 933870 ZBTB33 GTRD no Brain (SK-N-SH) 21830579
chr19 933080 933870 ZBTB33 GTRD no Brain (SK-N-SH) 108348207
chr19 933154 933993 P63 GTRD no Skin (Keratinocyte) 108348217
chr19 933314 933958 P63 GTRD no Skin (Keratinocyte) 108348235
chr19 933367 933947 P63 GTRD no Skin (Keratinocyte) 108348245
chr19 933841 933861 RREB1 JASPAR yes 111983662
Genes associated with rs553690009[chr19:933860], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More