EnhancerDB
  1. Home
  2. SNP
  3. rs553703931[chr1:202000177]
Enhancers that have rs553703931[chr1:202000177]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 201996265 202020435 enh12533
Brain (SK-N-MC) Astrocyte Colon (HCT116) Pancreas Uterus Kidney Stomach Epithelial (MCF-7) Bone (Osteoblast) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Muscle (A673)
Transcript factors that have rs553703931[chr1:202000177]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 201999254 202000504 ZNF274 GTRD no Cervix (HeLa-S3) 21365456
chr1 201999256 202000428 ZNF143 GTRD no Epithelial (MCF-7) 21365457
chr1 201999457 202000189 ZNF143 GTRD no Epithelial (MCF-7) 21365458
chr1 201999521 202000180 ZNF274 GTRD no Liver (HepG2) 21365461
chr1 201999525 202000491 ZNF143 GTRD no Epithelial (MCF-7) 21365462
chr1 201999558 202000228 ZNF274 GTRD no Liver (HepG2) 21365472
chr1 202000164 202000179 MEF2C JASPAR yes 34543577
chr1 202000165 202000180 MEF2A JASPAR yes 34543578
chr1 202000166 202000178 MEF2A JASPAR yes 34543579
chr1 202000166 202000178 MEF2B JASPAR yes 34543580
chr1 202000166 202000178 MEF2D JASPAR yes 34543581
chr1 202000172 202000187 MEF2C JASPAR yes 34543582
chr1 202000173 202000188 FOXP1 JASPAR yes 34543583
Genes associated with rs553703931[chr1:202000177], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More