EnhancerDB
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  3. rs553713758[chr15:41542028]
Enhancers that have rs553713758[chr15:41542028]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr15 41539463 41554335 enh3544
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Lung (PC-9) Astrocyte Lung Blood (OCI-LY7) Stomach Colon (HCT116) Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Heart
Transcript factors that have rs553713758[chr15:41542028]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr15 41542022 41542043 IRF1 JASPAR yes 22978059
chr15 41542023 41542044 IRF1 JASPAR yes 22978060
chr15 41542025 41542046 IRF1 JASPAR yes 22978061
chr15 41542027 41542042 FOXP1 JASPAR yes 22978062
chr15 41542027 41542048 IRF1 JASPAR yes 22978063
chr15 41542028 41542043 FOXP1 JASPAR yes 22978064
Genes associated with rs553713758[chr15:41542028], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More