EnhancerDB
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  3. rs553715641[chr1:40294154]
Enhancers that have rs553715641[chr1:40294154]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 40278465 40303035 enh11766
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Bone (Osteoblast) Blood (OCI-LY7) Stomach Placenta Colon (HCT116) Peripheral Blood (MM.1S) Lung (PC-9) Thymus Epithelial (MCF-7)
Transcript factors that have rs553715641[chr1:40294154]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 40294138 40294158 RREB1 JASPAR yes 28294400
chr1 40294144 40294164 RREB1 JASPAR yes 28294401
chr1 40294146 40294166 RREB1 JASPAR yes 28294402
chr1 40294154 40294174 RREB1 JASPAR yes 28294403
Genes associated with rs553715641[chr1:40294154], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More