EnhancerDB
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  3. rs553740381[chr6:13355809]
Enhancers that have rs553740381[chr6:13355809]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr6 13348613 13358032 enh8959
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Epithelial (MCF-7) Prostate (RWPE1) Blood (T-cell) Esophagus Astrocyte Lung (PC-9) Blood (OCI-LY7) Blood (GM12878) Stomach Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Muscle (Myoblast) Breast Thymus Heart
Transcript factors that have rs553740381[chr6:13355809]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr6 13355804 13355819 RUNX2 JASPAR yes 100020023
chr6 13355805 13355823 NFYA JASPAR yes 100020024
chr6 13355808 13355818 RUNX3 JASPAR yes 100020025
chr6 13355809 13355818 RUNX2 JASPAR yes 100020026
Genes associated with rs553740381[chr6:13355809], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More