EnhancerDB
  1. Home
  2. SNP
  3. rs553762366[chr1:23920820]
Enhancers that have rs553762366[chr1:23920820]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23909968 23931495 enh127
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Blood (Karpas-422) Embryonic Stem Cell Line (H1-hESC) Pancreas Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Neural Stem Cells (H9) Thymus Prostate (PC-3) Cervix (HeLa-S3) Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Liver (HepG2) Prostate (RWPE1) Muscle (A673)
Transcript factors that have rs553762366[chr1:23920820]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23920814 23920830 SRF JASPAR yes 27445015
chr1 23920817 23920829 SRF JASPAR yes 27445016
chr1 23920820 23920824 YY1 TRANSFAC yes 27445017
Genes associated with rs553762366[chr1:23920820], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More