EnhancerDB
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  3. rs553765013[chr1:228072707]
Enhancers that have rs553765013[chr1:228072707]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 228069592 228093895 enh12737
Bone Marrow (K562) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Prostate (RWPE1) Blood (T-cell) Lung Stomach Placenta Breast Embryonic Stem Cell Line (H1-hESC) Pancreas Muscle (Myotube) Uterus Thymus Epithelial (MCF-7)
Transcript factors that have rs553765013[chr1:228072707]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 228071432 228073682 ZNF274 GTRD no Blood (GM12878) 107876764
chr1 228071585 228073575 ZBTB33 GTRD no Lung (A549) 107876765
chr1 228071957 228073201 ZNF274 GTRD no Blood (GM12878) 107876766
chr1 228072053 228073601 ZBTB33 GTRD no Lung (A549) 107876767
chr1 228072105 228072718 ZNF274 GTRD no Bone Marrow (K562) 21388226
chr1 228072212 228073075 ZNF274 GTRD no Bone Marrow (K562) 21388227
chr1 228072216 228072739 ZNF274 GTRD no Cervix (HeLa-S3) 21388228
chr1 228072222 228072903 ZNF143 GTRD no Epithelial (MCF-7) 21388229
chr1 228072234 228072875 ZNF274 GTRD no Bone Marrow (K562) 21388230
chr1 228072316 228073559 ZNF274 GTRD no Blood (GM12878) 107876768
chr1 228072370 228074595 TCF7L2 GTRD no Colon (HCT116) 107876769
chr1 228072421 228072782 ZNF143 GTRD no Epithelial (MCF-7) 21388233
chr1 228072459 228073484 ZNF274 GTRD no Bone Marrow (K562) 21388234
chr1 228072459 228073484 ZNF274 GTRD no Bone Marrow (K562) 107876770
chr1 228072567 228073226 ZNF274 GTRD no Bone Marrow (K562) 21388235
chr1 228072567 228073226 ZNF274 GTRD no Bone Marrow (K562) 107876771
chr1 228072579 228074663 TCF7L2 GTRD no Colon (HCT116) 107876772
chr1 228072697 228072714 RARA JASPAR yes 35890291
Genes associated with rs553765013[chr1:228072707], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More