EnhancerDB
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  3. rs553770166[chr2:224685386]
Enhancers that have rs553770166[chr2:224685386]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 224677744 224699315 enh34325
Skin (Keratinocyte) Prostate (PC-3) Kidney Cervix (HeLa-S3) Brain (SK-N-MC) Prostate (RWPE1) Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Muscle (A673) Colon (HCT116) Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Neural Stem Cells (H9) Epithelial (MCF-7)
Transcript factors that have rs553770166[chr2:224685386]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 224685368 224685386 SRF JASPAR yes 81291212
chr2 224685379 224685400 IRF1 JASPAR yes 81291213
chr2 224685381 224685402 IRF1 JASPAR yes 81291214
chr2 224685382 224685397 FOXP1 JASPAR yes 81291215
chr2 224685383 224685398 FOXP1 JASPAR yes 81291216
chr2 224685383 224685404 IRF1 JASPAR yes 81291217
chr2 224685384 224685399 FOXP1 JASPAR yes 81291218
chr2 224685384 224685405 IRF1 JASPAR yes 81291219
chr2 224685385 224685400 FOXP1 JASPAR yes 81291220
chr2 224685385 224685406 IRF1 JASPAR yes 81291221
chr2 224685386 224685401 FOXP1 JASPAR yes 81291222
chr2 224685386 224685407 IRF1 JASPAR yes 81291223
Genes associated with rs553770166[chr2:224685386], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More