EnhancerDB
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  3. rs553888581[chr2:121294124]
Enhancers that have rs553888581[chr2:121294124]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 121291785 121313375 enh18845
Liver Astrocyte Pancreas Uterus Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Muscle (A673) Heart
Transcript factors that have rs553888581[chr2:121294124]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 121294115 121294130 ZIC3 JASPAR yes 76546648
chr2 121294115 121294130 ZIC4 JASPAR yes 76546649
chr2 121294115 121294131 GLIS1 JASPAR yes 76546650
chr2 121294116 121294130 GLIS2 JASPAR yes 76546651
chr2 121294116 121294130 GLIS3 JASPAR yes 76546652
chr2 121294116 121294130 ZIC1 JASPAR yes 76546653
chr2 121294120 121294130 ZNF740 JASPAR yes 76546654
chr2 121294124 121294142 RARA JASPAR yes 76546655
Genes associated with rs553888581[chr2:121294124], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More