EnhancerDB
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  3. rs553898438[chr17:39854456]
Enhancers that have rs553898438[chr17:39854456]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 39847049 39856155 enh17153
Bone Marrow (K562) Large Intestine Prostate (RWPE1) Esophagus Ovary Bone (Osteoblast) Stomach Placenta Peripheral Blood (MM.1S) Adrenal Pancreas Spleen Uterus Heart
Transcript factors that have rs553898438[chr17:39854456]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 39854454 39854469 FOXP1 JASPAR yes 54274271
chr17 39854455 39854470 FOXP1 JASPAR yes 54274272
chr17 39854456 39854471 FOXP1 JASPAR yes 54274273
chr17 39854456 39854477 IRF1 JASPAR yes 54274274
Genes associated with rs553898438[chr17:39854456], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More