EnhancerDB
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  3. rs553900135[chr17:77967027]
Enhancers that have rs553900135[chr17:77967027]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 77955405 77983735 enh17427
Prostate (PC-3) Liver (HepG2) Brain (SK-N-SH) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Ovary Blood (T-cell) Bone (Osteoblast) Muscle (A673) Placenta Colon (HCT116) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Stomach
Transcript factors that have rs553900135[chr17:77967027]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 77966299 77967048 ZBTB33 GTRD no Brain (SK-N-SH) 21796867
chr17 77966299 77967048 ZBTB33 GTRD no Brain (SK-N-SH) 108305777
chr17 77966342 77967034 ZBTB33 GTRD no Brain (SK-N-SH) 21796868
chr17 77966342 77967034 ZBTB33 GTRD no Brain (SK-N-SH) 108305778
chr17 77966948 77967880 POLR2A UCSC Txn Factor no Conserved 108305779
chr17 77966970 77967674 ZNF274 GTRD no Bone Marrow (K562) 108305780
chr17 77967024 77967028 NFE TRANSFAC yes 56235644
chr17 77967025 77967044 CTCF JASPAR yes 56235645
chr17 77967027 77967046 CTCF JASPAR yes 56235646
Genes associated with rs553900135[chr17:77967027], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More