EnhancerDB
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  3. rs553921738[chr3:124860365]
Enhancers that have rs553921738[chr3:124860365]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 124842678 124871615 enh7502
Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Thyroid Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Spleen Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs553921738[chr3:124860365]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 124860146 124860851 NFIC UCSC Txn Factor no Conserved 108530161
chr3 124860228 124861028 RUNX3 UCSC Txn Factor no Conserved 108530162
chr3 124860258 124860722 FOXM1 UCSC Txn Factor no Conserved 108530163
chr3 124860278 124860688 TBL1XR1 UCSC Txn Factor no Conserved 108530164
chr3 124860358 124860368 ID4 JASPAR yes 5428614
chr3 124860358 124860368 NHLH1 JASPAR yes 5428615
chr3 124860358 124860368 TCF3 JASPAR yes 5428616
chr3 124860358 124860368 TCF4 JASPAR yes 5428617
chr3 124860359 124860368 SNAI2 JASPAR yes 5428618
chr3 124860360 124860365 USF2 TRANSFAC yes 5428619
Genes associated with rs553921738[chr3:124860365], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More