EnhancerDB
  1. Home
  2. SNP
  3. rs553934314[chr1:3481942]
Enhancers that have rs553934314[chr1:3481942]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 3448190 3482098 enh11432
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Brain (SK-N-MC) Prostate (RWPE1) Brain (SK-N-SH) Esophagus Astrocyte Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Pancreas (Panc1) Muscle (Myotube) Uterus Thymus Heart
Transcript factors that have rs553934314[chr1:3481942]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 3481930 3481944 GLIS2 JASPAR yes 26296802
chr1 3481939 3481943 H4TF2 TRANSFAC yes 26296803
Genes associated with rs553934314[chr1:3481942], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More