EnhancerDB
  1. Home
  2. SNP
  3. rs553966040[chr1:118368014]
Enhancers that have rs553966040[chr1:118368014]
Back to top
Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 118361306 118373131 enh27111
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-SH) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Colon (HCT116) Lung (PC-9) Pancreas Pancreas (Panc1) Heart
Transcript factors that have rs553966040[chr1:118368014]
Back to top
Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 118367950 118368466 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21334880
chr1 118368014 118368022 OTX2 JASPAR yes 31902820
Genes associated with rs553966040[chr1:118368014], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More