EnhancerDB
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  3. rs554000522[chr1:212663603]
Enhancers that have rs554000522[chr1:212663603]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 212648565 212664795 enh12641
Astrocyte Colon (HCT116) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Bone (Osteoblast) Thyroid Peripheral Blood (MM.1S) Pancreas (Panc1) Thymus Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Breast Muscle (Myoblast) Spleen Muscle (Myotube) Liver (HepG2) Prostate (RWPE1)
Transcript factors that have rs554000522[chr1:212663603]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 212663597 212663618 IRF1 JASPAR yes 35129707
chr1 212663599 212663614 STAT2 JASPAR yes 35129708
chr1 212663603 212663618 FOXP1 JASPAR yes 35129709
Genes associated with rs554000522[chr1:212663603], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More