EnhancerDB
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  3. rs554007478[chr16:85429209]
Enhancers that have rs554007478[chr16:85429209]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 85422125 85439595 enh4173
Bone Marrow (K562) Brain (SK-N-MC) Astrocyte Colon (HCT116) Blood (Karpas-422) Pancreas Uterus Stomach Epithelial (MCF-7) Brain (SK-N-SH) Ovary Bone (Osteoblast) Thyroid Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Breast Muscle (Myoblast) Muscle (Myotube) Prostate (RWPE1) Lung Muscle (A673)
Transcript factors that have rs554007478[chr16:85429209]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 85427696 85432177 TCF7L2 GTRD no Colon (HCT116) 21724944
chr16 85427696 85432177 TCF7L2 GTRD no Colon (HCT116) 108214333
chr16 85427873 85429778 ZNF274 GTRD no Bone Marrow (K562) 21724948
chr16 85427873 85429778 ZNF274 GTRD no Bone Marrow (K562) 108214335
chr16 85427878 85430316 ZNF143 GTRD no Epithelial (MCF-7) 21724950
chr16 85427878 85430316 ZNF143 GTRD no Epithelial (MCF-7) 108214337
chr16 85427884 85429269 ZNF274 GTRD no Bone Marrow (K562) 21724951
chr16 85427884 85429269 ZNF274 GTRD no Bone Marrow (K562) 108214338
chr16 85427894 85430027 ZNF143 GTRD no Epithelial (MCF-7) 21724953
chr16 85427894 85430027 ZNF143 GTRD no Epithelial (MCF-7) 108214340
chr16 85427899 85431855 ZNF143 GTRD no Epithelial (MCF-7) 21724954
chr16 85427899 85431855 ZNF143 GTRD no Epithelial (MCF-7) 108214341
chr16 85427900 85430008 ZNF143 GTRD no Epithelial (MCF-7) 21724955
chr16 85427900 85430008 ZNF143 GTRD no Epithelial (MCF-7) 108214342
chr16 85427930 85430858 ZNF143 GTRD no Epithelial (MCF-7) 21724958
chr16 85427930 85430858 ZNF143 GTRD no Epithelial (MCF-7) 108214345
chr16 85427941 85431397 ZNF143 GTRD no Epithelial (MCF-7) 21724961
chr16 85427941 85431397 ZNF143 GTRD no Epithelial (MCF-7) 108214347
chr16 85427943 85430007 ZNF143 GTRD no Epithelial (MCF-7) 21724963
chr16 85427943 85430007 ZNF143 GTRD no Epithelial (MCF-7) 108214348
chr16 85427946 85429644 ZBTB33 GTRD no Lung (A549) 108214349
chr16 85427961 85430115 ZNF143 GTRD no Epithelial (MCF-7) 21724966
chr16 85427961 85430115 ZNF143 GTRD no Epithelial (MCF-7) 108214350
chr16 85427989 85430001 TCF7L2 GTRD no Colon (HCT116) 21724970
chr16 85427989 85430001 TCF7L2 GTRD no Colon (HCT116) 108214352
chr16 85428023 85430435 ZNF143 GTRD no Epithelial (MCF-7) 21724972
chr16 85428023 85430435 ZNF143 GTRD no Epithelial (MCF-7) 108214353
chr16 85428720 85429370 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21725000
chr16 85428720 85429370 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108214354
chr16 85428803 85429309 ZNF274 GTRD no Bone Marrow (K562) 21725001
chr16 85428803 85429309 ZNF274 GTRD no Bone Marrow (K562) 108214355
chr16 85428847 85429403 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21725002
chr16 85428847 85429403 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214356
chr16 85428951 85429786 TCF7L2 GTRD no Colon (HCT116) 21725004
chr16 85428951 85429786 TCF7L2 GTRD no Colon (HCT116) 108214358
chr16 85428981 85429877 ZNF274 GTRD no Liver (HepG2) 108214359
chr16 85429029 85429473 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21725005
chr16 85429029 85429473 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108214361
chr16 85429031 85429495 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21725006
chr16 85429031 85429495 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108214362
chr16 85429041 85429697 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21725007
chr16 85429041 85429697 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 108214363
chr16 85429048 85429312 ZZZ3 ENCODE Uniform TFBS no Blood (GM12878) 108214364
chr16 85429053 85429449 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21725008
chr16 85429053 85429449 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 108214365
chr16 85429065 85429441 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21725009
chr16 85429065 85429441 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 108214366
chr16 85429094 85429997 TCF7L2 GTRD no Colon (HCT116) 21725010
chr16 85429094 85429997 TCF7L2 GTRD no Colon (HCT116) 108214367
chr16 85429108 85429875 ZNF274 GTRD no Bone Marrow (K562) 21725011
chr16 85429108 85429875 ZNF274 GTRD no Bone Marrow (K562) 108214368
chr16 85429126 85429496 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21725012
chr16 85429126 85429496 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214369
chr16 85429150 85429554 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21725013
chr16 85429150 85429554 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214370
chr16 85429155 85429658 ZNF274 GTRD no Bone Marrow (K562) 21725014
chr16 85429155 85429658 ZNF274 GTRD no Bone Marrow (K562) 108214371
chr16 85429156 85429436 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21725015
chr16 85429156 85429436 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 108214372
chr16 85429156 85429512 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21725016
chr16 85429156 85429512 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 108214373
chr16 85429179 85429459 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21725017
chr16 85429207 85429590 ZNF274 GTRD no Bone Marrow (K562) 21725018
Genes associated with rs554007478[chr16:85429209], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More