EnhancerDB
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  3. rs554020654[chr17:46567311]
Enhancers that have rs554020654[chr17:46567311]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 46553725 46585590 enh4456
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Stomach Epithelial (MCF-7) Skin (Keratinocyte) Bone (Osteoblast) Blood (OCI-LY7) Lung (A549) Peripheral Blood (MM.1S) Pancreas (Panc1) Prostate (PC-3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myoblast) Breast Muscle (Myotube) Prostate (RWPE1)
Transcript factors that have rs554020654[chr17:46567311]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 46567292 46567313 IRF1 JASPAR yes 54589223
chr17 46567295 46567316 ZNF263 JASPAR yes 54589224
chr17 46567307 46567317 MZF1 JASPAR yes 54589225
chr17 46567307 46567317 SP1 JASPAR yes 54589226
chr17 46567307 46567317 ZNF740 JASPAR yes 54589227
chr17 46567308 46567318 ZNF740 JASPAR yes 54589228
Genes associated with rs554020654[chr17:46567311], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More