EnhancerDB
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  3. rs554035254[chr16:30650596]
Enhancers that have rs554035254[chr16:30650596]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 30643305 30654955 enh3976
Prostate (RWPE1) Bone (Osteoblast) Stomach Colon (HCT116) Blood (Karpas-422) Pancreas (Panc1) Uterus Epithelial (MCF-7)
Transcript factors that have rs554035254[chr16:30650596]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 30649741 30651723 ZNF143 GTRD no Epithelial (MCF-7) 21704527
chr16 30649741 30652002 ZNF143 GTRD no Epithelial (MCF-7) 21704528
chr16 30649748 30652185 TCF7L2 GTRD no Colon (HCT116) 21704530
chr16 30649753 30651997 ZNF143 GTRD no Epithelial (MCF-7) 21704531
chr16 30649755 30652086 TCF7L2 GTRD no Colon (HCT116) 21704532
chr16 30649768 30652042 ZNF143 GTRD no Epithelial (MCF-7) 21704533
chr16 30649776 30651281 ZNF143 GTRD no Epithelial (MCF-7) 21704534
chr16 30649783 30652028 TCF7L2 GTRD no Colon (HCT116) 21704535
chr16 30649793 30652130 TCF7L2 GTRD no Colon (HCT116) 21704536
chr16 30649817 30651801 ZNF143 GTRD no Epithelial (MCF-7) 21704537
chr16 30649922 30651623 ZNF143 GTRD no Epithelial (MCF-7) 21704538
chr16 30649929 30651216 ZNF143 GTRD no Epithelial (MCF-7) 21704539
chr16 30650014 30651063 ZNF143 GTRD no Epithelial (MCF-7) 21704540
chr16 30650017 30652217 ZNF143 GTRD no Epithelial (MCF-7) 21704541
chr16 30650020 30652178 ZNF143 GTRD no Epithelial (MCF-7) 21704542
chr16 30650054 30652075 ZNF143 GTRD no Epithelial (MCF-7) 21704543
chr16 30650072 30652293 ZNF143 GTRD no Epithelial (MCF-7) 21704544
chr16 30650119 30651793 ZNF143 GTRD no Epithelial (MCF-7) 21704545
chr16 30650126 30652126 ZNF143 GTRD no Epithelial (MCF-7) 21704546
chr16 30650175 30652131 ZNF143 GTRD no Epithelial (MCF-7) 21704547
chr16 30650206 30652063 TCF7L2 GTRD no Colon (HCT116) 21704548
chr16 30650214 30651081 ZNF143 GTRD no Epithelial (MCF-7) 21704549
chr16 30650216 30651561 ZNF143 GTRD no Epithelial (MCF-7) 21704550
chr16 30650217 30651111 ZNF143 GTRD no Epithelial (MCF-7) 21704551
chr16 30650255 30650974 ZNF143 GTRD no Epithelial (MCF-7) 21704552
chr16 30650261 30650905 ZNF143 GTRD no Epithelial (MCF-7) 21704553
chr16 30650278 30650886 ZNF143 GTRD no Epithelial (MCF-7) 21704554
chr16 30650294 30651152 ZNF143 GTRD no Epithelial (MCF-7) 21704555
chr16 30650318 30651020 TCF7L2 GTRD no Colon (HCT116) 21704556
chr16 30650323 30650975 ZNF143 GTRD no Epithelial (MCF-7) 21704557
chr16 30650338 30650789 TCF7L2 GTRD no Colon (HCT116) 21704558
chr16 30650339 30651940 ZNF143 GTRD no Epithelial (MCF-7) 21704559
chr16 30650402 30652155 TCF7L2 GTRD no Colon (HCT116) 21704560
chr16 30650407 30651926 ZNF143 GTRD no Epithelial (MCF-7) 21704561
chr16 30650437 30652199 TCF7L2 GTRD no Colon (HCT116) 21704562
chr16 30650446 30652321 TCF7L2 GTRD no Colon (HCT116) 21704563
chr16 30650448 30651605 ZNF143 GTRD no Epithelial (MCF-7) 21704564
chr16 30650493 30652101 TCF7L2 GTRD no Colon (HCT116) 21704565
chr16 30650506 30652176 TCF7L2 GTRD no Colon (HCT116) 21704566
chr16 30650591 30650602 CEBPA JASPAR yes 10308182
chr16 30650591 30650603 HLF JASPAR yes 10308183
chr16 30650592 30650603 CEBPB JASPAR yes 10308184
chr16 30650593 30650606 NFKB1 JASPAR yes 10308185
chr16 30650593 30650606 NFKB2 JASPAR yes 10308186
chr16 30650596 30651137 ZNF143 GTRD no Epithelial (MCF-7) 21704567
Genes associated with rs554035254[chr16:30650596], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More