EnhancerDB
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  3. rs554057108[chr1:29298534]
Enhancers that have rs554057108[chr1:29298534]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 29289305 29304099 enh26594
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Liver Bone (Osteoblast) Muscle (A673) Colon (HCT116) Adrenal Lung (PC-9) Muscle (Myoblast) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs554057108[chr1:29298534]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 29298528 29298548 RREB1 JASPAR yes 27795373
chr1 29298530 29298550 RREB1 JASPAR yes 27795374
chr1 29298531 29298545 PLAG1 JASPAR yes 27795375
chr1 29298533 29298547 PLAG1 JASPAR yes 27795376
chr1 29298533 29298553 RREB1 JASPAR yes 27795377
Genes associated with rs554057108[chr1:29298534], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More