EnhancerDB
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  3. rs554058534[chr5:78271080]
Enhancers that have rs554058534[chr5:78271080]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr5 78266085 78279675 enh55336
Prostate (PC-3) Liver (HepG2) Kidney Brain (SK-N-MC) Large Intestine Brain (SK-N-SH) Bone (Osteoblast) Lung Blood (OCI-LY7) Blood (GM12878) Stomach Thyroid Lung (PC-9) Pancreas Pancreas (Panc1) Uterus Epithelial (MCF-7)
chr5 78270986 78271091 vista48178
VISTA
Transcript factors that have rs554058534[chr5:78271080]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr5 78271069 78271089 TP53 JASPAR yes 63636464
chr5 78271069 78271089 TP53 JASPAR yes 70670208
chr5 78271073 78271088 TP53 JASPAR yes 63636466
chr5 78271073 78271088 TP53 JASPAR yes 70670210
Genes associated with rs554058534[chr5:78271080], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More