EnhancerDB
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  3. rs554072578[chr2:219163839]
Enhancers that have rs554072578[chr2:219163839]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 219159703 219168321 enh19239
Liver (HepG2) Prostate (RWPE1) Placenta Colon (HCT116) Pancreas (Panc1) Lung (PC-9) Pancreas Spleen Neural Stem Cells (H9) Stomach
Transcript factors that have rs554072578[chr2:219163839]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 219163829 219163844 FOXA1 JASPAR yes 80996262
chr2 219163830 219163842 FOXI1 JASPAR yes 80996263
chr2 219163830 219163844 POU4F1 JASPAR yes 80996264
chr2 219163830 219163845 FOXP1 JASPAR yes 80996265
chr2 219163830 219163845 HNF1A JASPAR yes 80996266
chr2 219163831 219163843 FOXC2 JASPAR yes 80996267
chr2 219163831 219163845 ONECUT2 JASPAR yes 80996268
chr2 219163831 219163845 ONECUT3 JASPAR yes 80996269
chr2 219163832 219163843 FOXB1 JASPAR yes 80996270
chr2 219163832 219163843 FOXC1 JASPAR yes 80996271
chr2 219163832 219163843 PROP1 JASPAR yes 80996272
chr2 219163833 219163848 FOXA1 JASPAR yes 80996274
chr2 219163834 219163846 FOXI1 JASPAR yes 80996275
chr2 219163834 219163849 FOXP1 JASPAR yes 80996276
chr2 219163835 219163847 FOXC2 JASPAR yes 80996277
chr2 219163835 219163849 ONECUT2 JASPAR yes 80996278
chr2 219163835 219163849 ONECUT3 JASPAR yes 80996279
chr2 219163836 219163847 FOXB1 JASPAR yes 80996280
chr2 219163836 219163847 FOXC1 JASPAR yes 80996281
chr2 219163837 219163841 YY1 TRANSFAC yes 80996282
Genes associated with rs554072578[chr2:219163839], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More