EnhancerDB
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  3. rs554143630[chr1:39417660]
Enhancers that have rs554143630[chr1:39417660]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 39414298 39432055 enh11754
Bone Marrow (K562) Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Stomach Placenta Colon (HCT116) Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Epithelial (MCF-7)
Transcript factors that have rs554143630[chr1:39417660]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 39417652 39417670 E2F3 JASPAR yes 28243059
chr1 39417653 39417669 E2F2 JASPAR yes 28243060
chr1 39417654 39417667 ZBED1 JASPAR yes 28243061
Genes associated with rs554143630[chr1:39417660], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More