EnhancerDB
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  3. rs554157399[chr1:17854371]
Enhancers that have rs554157399[chr1:17854371]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 17837825 17860915 enh11557
Prostate (PC-3) Cervix (HeLa-S3) Epithelial (MCF-7) Large Intestine Esophagus Liver Bone (Osteoblast) Stomach Placenta Colon (HCT116) Thyroid Lung (PC-9) Pancreas Uterus Heart
Transcript factors that have rs554157399[chr1:17854371]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 17854351 17854372 IRF1 JASPAR yes 27098344
chr1 17854355 17854376 IRF1 JASPAR yes 27098347
chr1 17854356 17854371 FOXP1 JASPAR yes 27098348
chr1 17854356 17854377 IRF1 JASPAR yes 27098349
chr1 17854360 17854381 IRF1 JASPAR yes 27098350
chr1 17854361 17854376 FOXP1 JASPAR yes 27098351
chr1 17854361 17854382 IRF1 JASPAR yes 27098352
chr1 17854362 17854383 IRF1 JASPAR yes 27098353
chr1 17854363 17854378 FOXP1 JASPAR yes 27098354
chr1 17854365 17854380 FOXP1 JASPAR yes 27098355
chr1 17854366 17854381 FOXP1 JASPAR yes 27098356
chr1 17854367 17854382 FOXP1 JASPAR yes 27098357
chr1 17854368 17854383 FOXP1 JASPAR yes 27098358
chr1 17854369 17854384 FOXP1 JASPAR yes 27098359
chr1 17854370 17854385 FOXP1 JASPAR yes 27098360
Genes associated with rs554157399[chr1:17854371], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More