EnhancerDB
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  3. rs554172079[chr1:185537282]
Enhancers that have rs554172079[chr1:185537282]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 185522965 185545824 enh816
Skin (Keratinocyte) Prostate (PC-3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Esophagus Astrocyte Blood (T-cell) Muscle (A673) Placenta Peripheral Blood (MM.1S) Blood (Karpas-422) Pancreas Spleen Thymus Stomach
Transcript factors that have rs554172079[chr1:185537282]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 185536957 185538195 ZNF274 GTRD no Bone Marrow (K562) 107852493
chr1 185537279 185537294 FOXP1 JASPAR yes 33823374
chr1 185537280 185537295 FOXP1 JASPAR yes 33823375
chr1 185537281 185537296 FOXP1 JASPAR yes 33823376
chr1 185537281 185537302 IRF1 JASPAR yes 33823377
chr1 185537282 185537297 FOXP1 JASPAR yes 33823378
chr1 185537282 185537303 IRF1 JASPAR yes 33823379
Genes associated with rs554172079[chr1:185537282], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More