EnhancerDB
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  3. rs554179862[chr17:72564952]
Enhancers that have rs554179862[chr17:72564952]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr17 72560329 72568186 enh17368
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Placenta Pancreas Spleen Muscle (Myotube) Thymus Stomach
chr17 72564769 72564992 vista25915
VISTA
Transcript factors that have rs554179862[chr17:72564952]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr17 72564723 72565033 ZNF143 ENCODE Uniform TFBS no Embryonic Stem Cell Line (H1-hESC) 108291932
chr17 72564946 72564956 BHLHE40 JASPAR yes 21292934
chr17 72564946 72564956 CLOCK JASPAR yes 21292935
chr17 72564946 72564956 HEY1 JASPAR yes 21292936
chr17 72564946 72564956 MAX JASPAR yes 21292937
chr17 72564946 72564956 MNT JASPAR yes 21292938
chr17 72564946 72564956 BHLHE40 JASPAR yes 55915241
chr17 72564946 72564956 CLOCK JASPAR yes 55915242
chr17 72564946 72564956 HEY1 JASPAR yes 55915243
chr17 72564946 72564956 MAX JASPAR yes 55915244
chr17 72564946 72564956 MNT JASPAR yes 55915245
chr17 72564948 72564953 MYC TRANSFAC yes 21292939
chr17 72564948 72564953 USF1 TRANSFAC yes 21292940
chr17 72564948 72564953 USF2 TRANSFAC yes 21292941
chr17 72564948 72564953 MYC TRANSFAC yes 55915246
chr17 72564948 72564953 USF1 TRANSFAC yes 55915247
chr17 72564948 72564953 USF2 TRANSFAC yes 55915248
chr17 72564951 72564971 RREB1 JASPAR yes 21292942
chr17 72564951 72564971 RREB1 JASPAR yes 55915249
Genes associated with rs554179862[chr17:72564952], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More