EnhancerDB
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  3. rs554189206[chr1:23944661]
Enhancers that have rs554189206[chr1:23944661]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 23931559 23968435 enh128
Bone Marrow (K562) Adrenal Blood (Karpas-422) Pancreas Uterus Blood (T-cell) Stomach Brain (SK-N-SH) Bone (Osteoblast) Blood (OCI-LY7) Thyroid Peripheral Blood (MM.1S) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Blood (GM12878) Placenta Lung (PC-9) Muscle (Myotube) Prostate (RWPE1) Muscle (A673) Heart
Transcript factors that have rs554189206[chr1:23944661]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 23944642 23944663 IRF1 JASPAR yes 27448474
chr1 23944647 23944662 FOXP1 JASPAR yes 27448476
chr1 23944648 23944663 FOXP1 JASPAR yes 27448477
chr1 23944649 23944664 FOXP1 JASPAR yes 27448478
chr1 23944651 23944666 MEF2C JASPAR yes 27448479
Genes associated with rs554189206[chr1:23944661], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More