-
Home
- SNP
- rs554197543[chr17:48809681]
Enhancers that have rs554197543[chr17:48809681]
Back to top
| Chrom. |
Start |
End |
Enhancer ID |
Tissues that enhancer appears |
More |
| chr17 |
48801785 |
48811959 |
enh52524 |
|
|
Transcript factors that have rs554197543[chr17:48809681]
Back to top
| Chrom. |
Start |
End |
TF name |
Source |
Predicted site? |
Tissue |
id |
More |
|
chr17
|
48809672
|
48809685
|
SMAD2
|
JASPAR
|
yes
|
|
54716024
|
|
|
chr17
|
48809675
|
48809686
|
TBX2
|
JASPAR
|
yes
|
|
54716025
|
|
|
chr17
|
48809676
|
48809686
|
TBX21
|
JASPAR
|
yes
|
|
54716026
|
|
|
chr17
|
48809677
|
48809685
|
MGA
|
JASPAR
|
yes
|
|
54716028
|
|
|
chr17
|
48809677
|
48809685
|
TBX15
|
JASPAR
|
yes
|
|
54716029
|
|
|
chr17
|
48809677
|
48809685
|
TBX1
|
JASPAR
|
yes
|
|
54716030
|
|
|
chr17
|
48809677
|
48809685
|
TBX4
|
JASPAR
|
yes
|
|
54716031
|
|
|
chr17
|
48809677
|
48809685
|
TBX5
|
JASPAR
|
yes
|
|
54716032
|
|
|
chr17
|
48809678
|
48809688
|
MSC
|
JASPAR
|
yes
|
|
54716033
|
|
|
chr17
|
48809678
|
48809699
|
IRF1
|
JASPAR
|
yes
|
|
54716034
|
|
Genes associated with rs554197543[chr17:48809681], comfirmed by eQTL
Back to top
Blank TSI value indicates lack of sufficient expression for calculation
| Chrom. |
Start |
End |
Strand |
Gene name |
Ensembl ID |
TSS of gene |
Distance between TSS and SNP |
Tissue |
q Value |
id |
More |