EnhancerDB
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  3. rs554201550[chr16:29606700]
Enhancers that have rs554201550[chr16:29606700]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr16 29603958 29628535 enh3968
Bone Marrow (K562) Astrocyte Colon (HCT116) Blood (Karpas-422) Uterus Blood (T-cell) Epithelial (MCF-7) Stomach Brain (SK-N-SH) Bone (Osteoblast) Lung (A549) Pancreas (Panc1) Thymus Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myoblast) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Heart
Transcript factors that have rs554201550[chr16:29606700]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr16 29606153 29606777 TCF7L2 GTRD no Colon (HCT116) 21702584
chr16 29606230 29606954 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21702585
chr16 29606314 29606824 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21702586
chr16 29606352 29607008 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21702587
chr16 29606364 29606774 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21702589
chr16 29606388 29606964 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21702592
chr16 29606428 29606764 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21702594
chr16 29606436 29606808 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21702595
chr16 29606436 29606880 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21702596
chr16 29606443 29606792 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21702597
chr16 29606457 29606788 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21702598
chr16 29606465 29606775 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21702599
chr16 29606466 29606922 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21702600
chr16 29606468 29606778 ZBTB33 ENCODE Uniform TFBS no Lung (A549) 21702601
chr16 29606470 29606779 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21702602
chr16 29606475 29606875 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21702603
chr16 29606478 29606854 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21702604
chr16 29606483 29606769 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21702605
chr16 29606487 29606847 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21702606
chr16 29606495 29606951 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21702607
chr16 29606510 29606820 TAF1 ENCODE Uniform TFBS no Brain (SK-N-SH) 21702608
chr16 29606514 29606874 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21702609
chr16 29606515 29606717 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21702610
chr16 29606515 29606851 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21702611
chr16 29606516 29606731 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21702612
chr16 29606520 29606744 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21702613
chr16 29606528 29606918 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21702614
chr16 29606534 29606794 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21702615
chr16 29606537 29606907 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21702616
chr16 29606552 29607208 ZNF217 ENCODE Uniform TFBS no Epithelial (MCF-7) 21702618
chr16 29606557 29606857 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21702619
chr16 29606558 29606834 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21702620
chr16 29606574 29606864 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21702621
chr16 29606589 29607165 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21702622
chr16 29606602 29606972 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21702623
chr16 29606617 29606756 ZNF274 ENCODE Uniform TFBS no Bone Marrow (K562) 21702624
chr16 29606620 29607136 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21702625
chr16 29606634 29607164 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21702626
chr16 29606656 29606972 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21702627
chr16 29606676 29607076 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21702628
chr16 29606676 29607146 TCF7L2 ENCODE Uniform TFBS no Pancreas (Panc1) 21702629
chr16 29606688 29607084 ZZZ3 ENCODE Uniform TFBS no Cervix (HeLa-S3) 21702630
chr16 29606692 29607052 ZNF274 ENCODE Uniform TFBS no Liver (HepG2) 21702631
chr16 29606698 29607162 ZBTB33 ENCODE Uniform TFBS no Colon (HCT116) 21702632
chr16 29606700 29606704 NFE TRANSFAC yes 10265910
Genes associated with rs554201550[chr16:29606700], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More