EnhancerDB
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  3. rs554212385[chr1:202047623]
Enhancers that have rs554212385[chr1:202047623]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 202022729 202063855 enh12534
Bone Marrow (K562) Liver Astrocyte Colon (HCT116) Pancreas Epithelial (MCF-7) Stomach Brain (SK-N-SH) Pancreas (Panc1) Neural Stem Cells (H9) Prostate (PC-3) Cervix (HeLa-S3) Large Intestine Esophagus Placenta Lung (PC-9) Muscle (Myotube) Liver (HepG2) Prostate (RWPE1) Lung Heart
Transcript factors that have rs554212385[chr1:202047623]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 202043783 202048658 ZNF143 GTRD no Epithelial (MCF-7) 21366478
chr1 202043783 202048658 ZNF143 GTRD no Epithelial (MCF-7) 107857652
chr1 202044334 202047849 ZNF143 GTRD no Epithelial (MCF-7) 21366482
chr1 202044334 202047849 ZNF143 GTRD no Epithelial (MCF-7) 107857653
chr1 202044561 202050029 ZNF143 GTRD no Epithelial (MCF-7) 21366484
chr1 202044561 202050029 ZNF143 GTRD no Epithelial (MCF-7) 107857654
chr1 202045273 202048470 ZNF143 GTRD no Epithelial (MCF-7) 21366526
chr1 202045273 202048470 ZNF143 GTRD no Epithelial (MCF-7) 107857704
chr1 202045278 202048203 ZNF274 GTRD no Cervix (HeLa-S3) 21366527
chr1 202045278 202048203 ZNF274 GTRD no Cervix (HeLa-S3) 107857705
chr1 202045367 202048492 ZNF143 GTRD no Epithelial (MCF-7) 21366533
chr1 202045367 202048492 ZNF143 GTRD no Epithelial (MCF-7) 107857713
chr1 202045435 202048656 ZNF143 GTRD no Epithelial (MCF-7) 21366534
chr1 202045435 202048656 ZNF143 GTRD no Epithelial (MCF-7) 107857714
chr1 202045446 202048007 ZBTB33 GTRD no Lung (A549) 107857715
chr1 202045486 202047915 ZNF143 GTRD no Epithelial (MCF-7) 21366536
chr1 202045486 202047915 ZNF143 GTRD no Epithelial (MCF-7) 107857717
chr1 202045513 202048075 ZNF143 GTRD no Epithelial (MCF-7) 21366538
chr1 202045513 202048075 ZNF143 GTRD no Epithelial (MCF-7) 107857719
chr1 202045553 202048520 ZNF143 GTRD no Epithelial (MCF-7) 21366540
chr1 202045578 202047953 ZNF143 GTRD no Epithelial (MCF-7) 21366542
chr1 202045601 202047864 ZNF143 GTRD no Epithelial (MCF-7) 21366544
chr1 202045609 202047827 ZNF143 GTRD no Epithelial (MCF-7) 21366545
chr1 202045618 202047834 TCF7L2 GTRD no Colon (HCT116) 21366546
chr1 202045621 202048485 ZNF143 GTRD no Epithelial (MCF-7) 21366547
chr1 202045637 202047802 ZNF143 GTRD no Epithelial (MCF-7) 21366548
chr1 202045647 202047861 ZNF143 GTRD no Epithelial (MCF-7) 21366549
chr1 202045669 202047872 ZNF143 GTRD no Epithelial (MCF-7) 21366550
chr1 202045696 202047969 ZNF143 GTRD no Epithelial (MCF-7) 21366552
chr1 202045718 202047880 ZNF143 GTRD no Epithelial (MCF-7) 21366553
chr1 202045736 202047858 ZNF143 GTRD no Epithelial (MCF-7) 21366554
chr1 202045775 202048411 ZNF143 GTRD no Epithelial (MCF-7) 21366556
chr1 202045777 202047826 ZNF143 GTRD no Epithelial (MCF-7) 21366558
chr1 202045782 202047746 ZNF143 GTRD no Epithelial (MCF-7) 21366559
chr1 202045797 202047882 ZNF143 GTRD no Epithelial (MCF-7) 21366560
chr1 202045835 202047676 ZNF143 GTRD no Epithelial (MCF-7) 21366563
chr1 202045844 202047857 ZNF143 GTRD no Epithelial (MCF-7) 21366565
chr1 202045860 202047675 ZNF143 GTRD no Epithelial (MCF-7) 21366566
chr1 202045869 202047644 ZNF143 GTRD no Epithelial (MCF-7) 21366569
chr1 202045874 202047717 ZNF274 GTRD no Liver (HepG2) 21366570
chr1 202045876 202047654 ZNF143 GTRD no Epithelial (MCF-7) 21366571
chr1 202045961 202047633 ZNF143 GTRD no Epithelial (MCF-7) 21366584
chr1 202046003 202047863 ZNF274 GTRD no Liver (HepG2) 21366602
chr1 202046045 202047768 AR GTRD no Prostate (PC-3) 21366622
chr1 202046071 202048502 ZNF274 GTRD no Liver (HepG2) 21366634
chr1 202046094 202047738 ZNF274 GTRD no Liver (HepG2) 21366641
chr1 202046095 202047756 ZNF274 GTRD no Liver (HepG2) 21366642
chr1 202046668 202047676 ZNF274 GTRD no Cervix (HeLa-S3) 21366662
chr1 202046715 202047636 ZNF274 GTRD no Bone Marrow (K562) 21366663
chr1 202046755 202047866 TCF7L2 GTRD no Colon (HCT116) 21366665
chr1 202046774 202047691 ZNF274 GTRD no Liver (HepG2) 21366668
chr1 202046820 202047811 ZNF274 GTRD no Liver (HepG2) 21366671
chr1 202046894 202047666 ZNF274 GTRD no Liver (HepG2) 21366678
chr1 202046942 202047633 ZNF274 GTRD no Liver (HepG2) 21366684
chr1 202047609 202047626 BCL6B JASPAR yes 34550516
chr1 202047617 202047625 FOXO3 JASPAR yes 34550517
chr1 202047621 202047633 TAL1 JASPAR yes 34550518
Genes associated with rs554212385[chr1:202047623], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More