EnhancerDB
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  3. rs554253407[chr3:187724292]
Enhancers that have rs554253407[chr3:187724292]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr3 187690405 187726875 enh7765
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Brain (SK-N-MC) Large Intestine Prostate (RWPE1) Blood (T-cell) Astrocyte Lung (PC-9) Blood (OCI-LY7) Stomach Thyroid Blood (Karpas-422) Muscle (Myoblast) Pancreas Muscle (Myotube) Thymus Heart
Transcript factors that have rs554253407[chr3:187724292]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr3 187724288 187724303 FOXP1 JASPAR yes 8436249
chr3 187724288 187724309 IRF1 JASPAR yes 8436250
chr3 187724289 187724304 FOXP1 JASPAR yes 8436251
chr3 187724292 187724307 STAT2 JASPAR yes 8436252
chr3 187724292 187724313 IRF1 JASPAR yes 8436253
Genes associated with rs554253407[chr3:187724292], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More