EnhancerDB
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  3. rs554298539[chr2:37774972]
Enhancers that have rs554298539[chr2:37774972]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr2 37774853 37803415 enh5416
Skin (Keratinocyte) Prostate (PC-3) Cervix (HeLa-S3) Brain (SK-N-SH) Brain (SK-N-MC) Prostate (RWPE1) Esophagus Astrocyte Blood (GM12878) Muscle (A673) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Muscle (Myoblast) Spleen Muscle (Myotube) Uterus
Transcript factors that have rs554298539[chr2:37774972]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr2 37774961 37774981 TP53 JASPAR yes 73059025
chr2 37774969 37774973 LFA1 TRANSFAC yes 73059027
Genes associated with rs554298539[chr2:37774972], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More