EnhancerDB
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  3. rs554312239[chr1:33418722]
Enhancers that have rs554312239[chr1:33418722]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 33412495 33428675 enh215
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Prostate (RWPE1) Esophagus Astrocyte Bone (Osteoblast) Blood (OCI-LY7) Colon (HCT116) Blood (Karpas-422) Lung (PC-9) Uterus
Transcript factors that have rs554312239[chr1:33418722]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 33418716 33418737 IRF1 JASPAR yes 28016616
chr1 33418718 33418733 PRDM1 JASPAR yes 28016618
chr1 33418718 33418733 STAT2 JASPAR yes 28016619
chr1 33418718 33418739 IRF1 JASPAR yes 28016620
Genes associated with rs554312239[chr1:33418722], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More