EnhancerDB
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  3. rs554316582[chr1:29291135]
Enhancers that have rs554316582[chr1:29291135]
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Chrom. Start End Enhancer ID Tissues that enhancer appears More
chr1 29289305 29304099 enh26594
Skin (Keratinocyte) Prostate (PC-3) Liver (HepG2) Cervix (HeLa-S3) Large Intestine Esophagus Astrocyte Liver Bone (Osteoblast) Muscle (A673) Colon (HCT116) Adrenal Lung (PC-9) Muscle (Myoblast) Uterus Blood (T-cell) Epithelial (MCF-7)
Transcript factors that have rs554316582[chr1:29291135]
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Chrom. Start End TF name Source Predicted site? Tissue id More
chr1 29291120 29291135 FOXA1 JASPAR yes 27794253
chr1 29291120 29291136 POU4F2 JASPAR yes 27794254
chr1 29291120 29291136 POU4F3 JASPAR yes 27794255
chr1 29291123 29291137 ONECUT2 JASPAR yes 27794261
chr1 29291123 29291137 ONECUT3 JASPAR yes 27794262
chr1 29291123 29291138 FOXP1 JASPAR yes 27794263
chr1 29291123 29291138 HNF1A JASPAR yes 27794264
chr1 29291124 29291138 POU4F1 JASPAR yes 27794265
chr1 29291124 29291139 FOXA1 JASPAR yes 27794266
chr1 29291124 29291140 POU4F2 JASPAR yes 27794267
chr1 29291124 29291140 POU4F3 JASPAR yes 27794268
chr1 29291125 29291136 FOXB1 JASPAR yes 27794269
chr1 29291125 29291136 FOXC1 JASPAR yes 27794270
chr1 29291125 29291136 PROP1 JASPAR yes 27794271
chr1 29291125 29291137 FOXC2 JASPAR yes 27794272
chr1 29291126 29291138 FOXI1 JASPAR yes 27794273
chr1 29291127 29291141 ONECUT2 JASPAR yes 27794274
chr1 29291127 29291141 ONECUT3 JASPAR yes 27794275
chr1 29291127 29291142 FOXP1 JASPAR yes 27794276
chr1 29291127 29291142 HNF1A JASPAR yes 27794277
chr1 29291128 29291142 POU4F1 JASPAR yes 27794278
chr1 29291128 29291143 FOXA1 JASPAR yes 27794279
chr1 29291129 29291140 FOXB1 JASPAR yes 27794280
chr1 29291129 29291140 FOXC1 JASPAR yes 27794281
chr1 29291129 29291140 PROP1 JASPAR yes 27794282
chr1 29291129 29291141 FOXC2 JASPAR yes 27794283
chr1 29291130 29291142 FOXI1 JASPAR yes 27794284
Genes associated with rs554316582[chr1:29291135], comfirmed by eQTL
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Blank TSI value indicates lack of sufficient expression for calculation
Chrom. Start End Strand Gene name Ensembl ID TSS of gene Distance between TSS and SNP Tissue q Value id More